Systems Biology


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TinkerCell  v.1.2.926

Computer-Aided Design in Synthetic Biology. TinkerCell is a Computer-Aided Design (CAD) tool for synthetic biology. Since synthetic biology is a rapidly evolving field,





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Cytoscape x64  v.3.0.0

Cytoscape x64 is an open source bioinformatics software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.

MZmine  v.2.10

MZmine 2 is an open-source project delivering a software for mass-spectrometry data processing, with the main focus on LC-MS data.

MSight  v.3.0.1

MSight is a new vision in Mass Spectrometry Imaging. MSight, created by the Proteome Informatics Group, was specifically developed for the representation of mass spectra along with data from the separation step.

BrukerBuster  v.1.0

BrukerBuster help you copy a directory tree generated by Bruker into a layout more suitable for reading.Please Note: this software is a Java Web Start Application, you need to right-click on the download file and choose "Launch".Requirements: * Java

Mz2mgf  v.1.3.5

Converts mzData files to MGF. mz2mgf can convert any mzData files to MGF. It can also convert BioTools xml files too. mz2mgf is a variation for Josh: Convert MS mzxml files to simple "RT m/z Intensity" TAB separated lines.Requirements: * JavaPlease

Mz2tsv  v.1.3.5

Java tool to convert mzxml files to TAB lines. mz2tsv can convert MS mzxml files to simple "RT m/z Intensity" TAB separated lines. It is very useful if you want to convert a lot of mzxml with ease.Requirements: * Java

DyNet  v.1.1

Dynamic network visualization made easy. dyNet is a Java program for dynamic network visualization, manipulation and clustering. Results can be exported in a variety of formats.dyNet Features: 1. dynamic network visualization 2. network manipulation

Multifactor Dimensionality Reduction  v.2.0 Beta 8.4

Data mining made easy. The objective of Multifactor Dimensionality Reduction is to make available an open-source version of our Multifactor Dimensionality Reduction (MDR) software.

RatioDiff  v.1.0.3

The Significance of the Difference Between Two Independent Proportions. Compute p-values with just a click. RatioDiff compute p-values. Just drag and drop your Excel spreadsheet file onto the logo.

GenomeComp  v.1.3

Genome wide sequence analysis made easy. GenomeComp is a DNA sequence comparison tool and graphical user interface (GUI) viewer implemented in Perl/Tk. It can read one, two or three input sequences in either of FASTA, GENBANK or EMBL format,

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